FRIDAYS, 12:15pm, PNI 230
1/5: Data presentation: Shruthi
1/12: Data presentation: Wayan
1/19: Journal Jam
1/26: Data presentation: Lily
2/2: Data presentation: Arie / Dean
2/9: Data presentation: Duncan
2/16: Cancelled
2/23: Data presentation: Albert
3/1: Journal Club: Lily
3/8: Journal Club: Mala
3/15: Data presentation: Max
3/22: Data presentation: Bartul
3/29: Cancelled
4/5: Journal Jam
4/12: Data presentation: Inwoo / Journal club: Duncan
4/19 (11 am): Journal club: Albert
4/29 (MONDAY): Data presentation: Krystal / Liza
5/3: PNI Retreat
5/10: Data presentation: Zijin
5/17: Journal club: Arie (with Seung lab)
5/24: Data presentation: Shruthi
5/31: Data presentation: Bella
6/7: Data presentation: Albert
6/14: Journal club: Max
6/21: Data presentation: Lily
6/28: Journal Jam
7/5: Data presentation: Duncan
7/12: Data presentation: Arie
7/19: Journal club: Bartul
PAST JOURNAL CLUB PAPERS (A complete list since our first journal club on 4/26/11; **bioRxiv papers):
Presynaptic Facilitation by Neuropeptide Signaling Mediates Odor-Driven Food Search. Root et al. Cell 2011
Brain Evolution Triggers Increased Diversification of Electric Fishes. Carlson et al. Science 2011
Visual Place Learning in Drosophila melanogaster. Ofstad et al. Nature 2011
Action-Potential Modulation During Axonal Conduction. Sasaki et al. Science 2011
Mushroom Body Efferent Neurons Responsible for Aversive Olfactory Memory Retrieval in Drosophila. Sejourne et al. Nature Neuro 2011
Turning Males On: Activation of Male Courtship Behavior in Drosophila melanogaster. Pan et al. PLoS one 2011
Songbirds possess the spontaneous ability to discriminate syntactic rules. Abe and Watanabe Nature Neuro 2011
Inducing Sleep by Remote Control Facilitates Memory Consolidation in Drosophila. Donlea et al. Science 2011
A versatile in vivo system for directed dissection of gene expression patterns. Gohl et al. Nat.Methods 2011 AND MiMIC: a highly versatile transposon insertion resource for engineering Drosophila melanogaster genes. Venken et all. Nat Methods 2011
Efficient transformation of an auditory population code in a small sensory system. Clemens et al. PNAS 2011
Classical conditioning through auditory stimuli in Drosophila: methods and models. Menda et al. JEB 2011
Parallel Processing of Apppetitive Short- and Long-Term Memories in Drosophila. Trannoy et al. Curr Biol 2011
Neural Mechanisms for the Coordination of Duet Singing in Wrens. Fortune et al. Science 2011
Multiple Arithmetic Operations in a Single Neuron: The Recruitment of Adaptation Processes in the Cricket Auditory Pathway Depends on Sensory Context. Hildebrandt et al. J. Neurosci. 2011
Different Roles for Homologous Interneurons in Species Exhibiting Similar Rhythmic Behaviors. Sakurai et al. Curr Biol. 2011
Optical Recording of Action Potentials in Mammalian Neurons using a Microbial Rhodopsin. Kralj et al. Nature Methods. 2012
Conditional modulation of spike-timing-dependent plasticity for olfactory learning. Cassenaer and Laurent. Nature. 2012
Visualizing Long-Term Memory Formation in Two Neurons of the Drosophila Brain. Chen et al. Science 2012
Neuronal correlates of a preference for leading signals in the synchronizing bushcricket. Siegert et al. JEB 2011
Active and Passive Antennal Movements during Visually Guided Steering in Flying Drosophila. Mamiya et al. J. Neurosci. 2011
Contribution of visual and circadian neural circuits to memory for prolonged mating induced by rivals. Kim et al. Nature Neuro 2012
Support for a synaptic chain model of neuronal sequence generation. Long et al. Nature 2010
Calling song recognition in female crickets: temporal tuning of identified brain neurons matches behavior. Kostarakos and Hedwig. J Neurosci. 2012
Directional cues in Drosophila melanogaster audition: structure of acoustic flow and inter-antennal velocity differences. Morley et al. J Exp Biol 2012
Normalization as a canonical neural computation. Carandini and Heeger. Nature Rev. Neurosci. 2012
A subset of dopamine neurons signals reward for odour memory in Drosophila. Liu et al. Nature 2012
Drosophila auditory organ genes and genetic hearing defects. Senthilan et al. Cell 2012
Fruitless recruits two antagonistic chromatin factors to establish single-neuron sexual dimorphism. Ito et al. Cell 2012
Neuronal arithmetic. Silver. Nature Reviews Neuro 2010
Neural Circuitry Underlying Drosophila Female Postmating Behavioral Responses. Rezaval et al. Curr Biol 2012
Substrate-Borne Vibratory Communication during Courtship in Drosophila melanogaster. Fabre et al. Curr Biol 2012
Asymmetric neurotransmitter release enables rapid odour lateralization in Drosophila. Gaudry et al. Nature 2013
Neural Basis of a Pollinator's Buffet: Olfactory Specialization and Learning in Manduca sexta. Riffell et al. Science 2013
Fruit Flies Medicate Offspring After Seeing Parasites. Kacsoh et al. Science 2013
Fasting Launches CRTC to Facilitate Long-Term Memory Formation in Drosophila. Hirano et al. Science 2013
Drosophila Tracks Carbon Dioxide in Flight. Wasserman et al. Curr Biol 2013
Hierarchy of orofacial rhythms revealed through whisking and breathing. Moore et al. Nature 2013
A single pair of interneurons commands the Drosophila feeding program. Flood et al. Nature 2013
Elemental gesture dynamics are encoded by song premotor cortical neurons. Amador et al. Nature 2013
Genetic and Neural Mechanisms that Inhibit Drosophila from Mating with Other Species. Fan et al. Cell 2013
Specific kinematics and motor-related neurons for aversive chemotaxis in Drosophila. Gao et al. Curr. Biol. 2013
A pair of interneurons influences the choice between feeding and locomotion in Drosophila. Mann et al. Neuron 2013
Different Kenyon Cell Populations Drive Learned Approach and Avoidance in Drosophila. Perisse et al. Neuron 2013
Feature detection and orientation tuning in the Drosophila central complex. Seeling + Jayaraman. Nature 2013
Odor discrimination in Drosophila: From neural populations codes to behavior. Parnas et al. Neuron 2013
Cellular and Behavioral Functions of fruitless Isoforms in Drosophila Courtship. von Philipsborn et al. Current Biology 2014
Genetic Identification and Separation of Innate and Experience-Dependent Courtship Behaviors in Drosophila. Pan and Baker Cell 2014
Drosophila Life Span and Physiology Are Modulated by Sexual Perception and Reward. Gendron et al. Science 2014
Optogenetic control of Drosophila using a red-shifted channelrhodopsin reveals experience-dependent influences on courtship. Inigaki et al. Nature Methods 2014
Various applications of TALEN- and CRISPR/Cas9-mediated homologous recombination to modify the Drosophila genome. Yu et al. Bio Open 2014 AND Highly specific and efficient CRISPR/Cas9-catalyzed homology-directed repair in Drosophila. Gratz et al. Genetics 2014
Discovery of brainwide neural-behavioral maps via multiscale unsupervised structure learning.Vogelstein et al. Science. 2014
Neural Pathways for the Detection and Discrimination of Conspecific Song in D. melanogaster. Vaughan et al. Curr Biol. 2014
Phase maintenance in a rhythmic motor pattern during temperature changes in vivo. Soofi et al. J Neurophys. 2014
FoxP influences the speed and accuracy of a perceptual decision in Drosophila. DasGupta et al. Science 2014
Central Brain Neurons Expressing doublesex Regulate Female Receptivity in Drosophila. Zhou et al. Neuron 2014 AND Abdominal-B Neurons Control Drosophila Virgin Female Receptivity. Bussell et al. Curr Biol 2014
Ascending SAG Neurons Control Sexual Receptivity of Drosophila Females. Feng et al. Neuron 2014
Phase-locking precision is enhanced by multiquantal release at an auditory hair cell ribbon synapse. Li et al. Neuron 2014
A spike-timing mechanism for action selection. von Reyn et al. Nature Neuro 2014
Processing properties of ON and OFF pathways for Drosophila motion detection. Behnia et al. Nature 2014
A PDF/NPF Neuropeptide Signaling Circuitry of Male Drosophila melanogaster Controls Rival-Induced Prolonged Mating. Kim et al. Neuron 2014
Neural correlates of water reward in thirsty Drosophila. Lin et al. Nature Neuro 2014
Internal models direct dragonfly interception steering. Michiati et al. Nature 2015
Labeling of active neural circuits in vivo with designed calcium integrators. Fosque et al. Science 2015
Thermosensory processing in the Drosophila brain. Liu et al. Nature 2015 AND Temperature representation in the Drosophila brain. Frank et al. Nature 2015
Visually induced initiation of Drosophila innate courtship-like following pursuit is mediated by central excitatory state. Kohatsu and Yamamoto. Nature Comm. 2014
High-fidelity optical reporting of neuronal electrical activity with an ultrafast fluorescent voltage sensor. St-Pierre et al. Nature Neuro 2014
Wide-Field Feedback Neurons Dynamically Tune Early Visual Processing. Tuthill et al. Neuron 2014
Neural Dynamics for landmark orientation and angular path integration. Seelig and Jayaraman. Nature 2015
Representations of Taste Modality in the Drosophila Brain. Harris et al. Neuron 2015
Computations underlying Drosophila photo-taxis, odor-taxis, and multi-sensory integration. Gepner et al. eLife 2015
Saccadic body turns in walking Drosophila. Geurten et al. Front. Behav. Neur. 2014
Multimodal Chemosensory Circuits Controlling Male Courtship in Drosophila. Clowney et al. Neuron 2015
Cellular evidence for efference copy in Drosophila visuomotor processing. Kim et al. Nature Neuro 2015
Central neural circuitry mediating courtship song perception in male Drosophila. Zhou et al. eLife 2015
An auditory feature detection circuit for sound pattern recognition. Schoneich et al. Science Advances 2015
Food odors trigger Drosophila males to deposit a pheromone that guides aggregation and female oviposition decisions. Lin et al. eLife 2015
P1 interneurons promote a persistent internal state that enhances inter-male aggression in Drosophila. Hoopfer et al. eLife 2015
Growth and splitting of neural sequences in songbird vocal development. Okubo et al. Nature 2015
Coordinated and Compartmentalized Neuromodulation Shapes Sensory Processing in Drosophila. Cohn et al. Cell 2015
Parallel Transformation of Tactile Signals in Central Circuits of Drosophila. Tuthill and Wilson. Cell 2016
Synchronous Drosophila circadian pacemakers display nonsynchronous Ca++ rhythms in vivo. Liang et al. Science 2016
Organization of projection neurons and local neurons of the primary auditory center in the fruit fly Drosophila melanogaster. Matsuo et al. J Comp Neurol 2016
Hormonal modulation of pheromone detection enhances male courtship success. Lin et al. Neuron 2016
Subcellular imaging of voltage and calcium signals reveals neural processing in vivo. Yang et al. Cell 2016
Automatic Segmentation of Drosophila Neural Compartments Using GAL4 Expression Data Reveals Novel Visual Pathways. Passer et al. Neuron 2016
Natural courtship song variation caused by an intronic retroelement in an ion channel gene. Ding et al. Nature 2016
The Neural Circuitry that Functions as a Switch for Courtship versus Aggression in Drosophila Males. Koganezawa et al. Curr Biol 2016
Operation of a homeostatic sleep switch. Pimentel et al. Nature 2016
Activation of Latent Courtship Circuitry in the Brain of Drosophila Females Induces Male-Like Behaviors. Rezaval et al. Curr Biol 2016
Jovanic et al. Competitive Disinhibition Mediates Behavioral Choice and Sequences in Drosophila. Cell 2016
Pavlou et al. Neural circuitry coordinating male copulation. eLife 2016
Chang et al. A Mechanosensory Circuit that Mixes Opponent Channels to Produce Selectivity for Complex Stimulus Features. Neuron 2016
Wu et al. Visual projection neurons in the Drosophila lobula link feature detection to distinct behavioral programs. eLife 2016
Prieto-Godino et al. Evolution of Acid-Sensing Olfactory Circuits in Drosopholids. Neuron 2017
Representations of Novelty and Familiarity in a Mushroom Body Compartment. Hattori et al. Cell 2017
apterous Brain Neurons Control Receptivity to Male Courtship in Drosophila melanogaster Females. Aranha et al. Sci Reports 2017
Neural signatures of dynamic stimulus selection in Drosophila. Sun et al. Nature Neuro. 2017
Genetic and neuronal mechanisms governing the sex-specific interaction between sleep and sexual behaviors in Drosophila. Chen et al. Nature Communications. 2017
Active Mechanisms of Vibration Encoding and Frequency Filtering in Central Mechanosensory Neurons. Azevedo and Wilson. Neuron 2017.
Transsynaptic Mapping of Second-Order Taste Neurons in Flies by trans-Tango. Talay et al. Neuron 2017.
**The functional organization of descending sensory-motor pathways in Drosophila. Namiki et al. bioRxiv 2017
Parallel encoding of recent visual experience and self-motion during navigation in Drosophila. Shiozaki and Kazama. Nature Neuroscience, 2017
**Imaging neural activity in the ventral nerve cord of behaving adult Drosophila. Chen et al. bioRxiv 2018
**Building a functional connectome of the Drosophila central complex. Franconville et al.
**Walking Drosophila aim to maintain a neural heading estimate at an internal goal angle. Green et al. bioRxiv 2018
**Innate visual preferences and behavioral flexibility in Drosophila. Grabowska et al. bioRxiv 2018
Multifunctional Wing Motor Control of Song and Flight. O’Sullivan et al. Curr Biol 2018
Motivation, Perception, and Chance Converge to Make a Binary Decision. Zhang et al. Neuron 2018
Visual Working Memory Requires Permissive and Instructive NO/cGMP Signaling at Presynapses in the Drosophila Central Brain. Kuntz et al. Curr Biol 2017
Evolution of a central neural circuit underlies Drosophila mate preferences. Seeholzer et al. Nature 2018
**Neural circuit basis of aversive odour processing inDrosophila from sensory input to descending output. Huoviala et al. bioRxiv. https://doi.org/10.1101/394403
A Brain Module for Scalable Control of Complex, Multi-motor Threat Displays. Duistermars et al. Neuron 2018.
Visual Projection Neurons Mediating Directed Courtship in Drosophila. Ribeiro et al. Cell 2018.
**Olfactory and neuromodulatory signals reverse visual object avoidance to approach in Drosophila. Cheng and Frye. bioRxiv 2018. https://doi.org/10.1101/472605
Molecular, spatial and functional single-cell profiling of the hypothalamic preoptic region. Moffitt et al. Science 2018
A compressed sensing framework for efficient dissection of neural circuits. Lee et al. Nature Methods 2018
Sound localization behavior in Drosophila melanogaster depends on inter-antenna vibration amplitude comparisons. Batchelor and Wilson JEB 2019
Brain-wide circuit interrogation at the cellular level guided by online analysis of neuronal function. Vladimirov et al. Nature Methods 2018
Activity-dependent visualization and control of neural circuits for courtship behavior in the fly Drosophila melanogaster. Takayanagi-Kiya and Kiya. PNAS 2019
Encoding of Wind Direction by Central Neurons in Drosophila. Suver et al. Neuron 2019
Ionotropic Receptors Specify the Morphogenesis of Phasic Sensors Controlling Rapid Thermal Preference in Drosophila. Budelli et al. Neuron 2019
Drosophila Acquires a Long-Lasting Body-Size Memory from Visual Feedback. Krause et al. Curr Biol 2019
A Neural Circuit Encoding the Experience of Copulation in Female Drosophila. Shao et al. Neuron. 2019
**Motor context coordinates visually guided walking in Drosophila. Cruz et al. bioRxiv 2019
Neuropeptide F regulates courtship in Drosophila through a male-specific neuronal circuit. Wu et al. eLife 2019
**Neurons that Function within an Integrator to Promote A Persistent Behavioral State in Drosophila. Jung et al. bioRxiv 2019
A Neural Circuit Arbitrates between Persistence and Withdrawal in Hungry Drosophila. Sayin et al. Neuron 2019
Functional and anatomical specificity in a higher olfactory centre. Frechter et al. eLife 2019
**The neuroanatomical ultrastructure and function of biological ring attractor. Turner-Evans et al. bioRxiv 2019
Diverse Community Structures in the Neuronal-Level Connectome of the Drosophila Brain. Shih et al. Neuroinformatics 2019
Neural circuitry linking mating and egg laying in Drosophila females. Wang et al. Nature 2020
Cortical pattern generation during dexterous movement is input-driven. Sauerbrei et al. Nature 2020
Mechanosensory circuits coordinate two opposing motor actions in Drosophila feeding. Zhou et al. Science Advances 2019
**Behavioural choice emerges from nonlinear all-to-all interactions between drives. Thornquist and Crickmore. bioRxiv 2020 10.1101/2020.03.12.989574
A neurodevelopmental origin of behavioral individuality in the Drosophila visual system. Linneweber et al. Science 2020
**Walking Drosophila navigate complex plumes using stochastic decisions biased by the timing of odor encounters. Demir et al. 2020 bioRxiv 10.1101/2020.03.23.004218
Anti-instinctive Learning Behavior Revealed by Locomotion-Triggered Mild Heat Stress in Drosophila. Sun et al. Front. Behav. Neurosci. 2020
**fruitless tunes functional flexibility of courtship circuitry during development. Chen et al. 2020 bioRxiv 10.1101/2020.06.20.163055
A Neural Network for Wind-Guided Compass Navigation. Okubo et al. Neuron 2020
**An Arousal-Gated Visual Circuit Controls Pursuit During Drosophila Courtship. Sten et al. bioRxiv 2020.
**Neural circuit mechanisms of sexual receptivity in Drosophila females. Wang et al. bioRxiv 2020.
Tuning movement for sensing in an uncertain world. Chen et al. eLife 2020.
**Widespread Polymodal Chemosensory Receptor Expression in Drosophila Olfactory Neurons. Task et al. bioRxiv 2020.
Hidden neural states underlie canary song syntax. Cohen et al. Nature 2020
A Neurocomputational Model of Stimulus-Specific Adaptation to Oddball and Markov Sequences. Mill et al. PLoS Comp Bio 2011
Amplitude modulations of cortical sensory responses in pulsatile evidence accumulation. Koay et al. eLife 2020
Dopamine-based mechanism for transient forgetting. Sabandal et al. Nature 2021
State-dependent encoding of exploratory behaviour in the amygdala. Fustinana et al. Nature 2021
Anatomy and activity patterns in a multifunctional motor neuron and its surrounding circuits. Ashaber et al. eLife 2021
Robustness and plasticity in Drosophila heat avoidance. Simons et al. Nature Comm 2021
The long-distance flight behavior of Drosophila supports an agent-based model for wind-assisted dispersal in insects. Leitch et al. PNAS 2021
A sex-specific switch between visual and olfactory inputs underlies adaptive sex differences in behavior. Nojima et al. Curr Biol 2021
**Distinct internal states interact to shape food choice by modulating sensorimotor processing at global and local scales. Munch et al. bioRxiv 2021
**A population of descending neurons that regulate the flight motor of Drosophila. Namiki et al. bioRxiv 2021
Low-dimensional learned feature spaces quantify individual and group differences in vocal repertoires. Goffinet et al. eLife 2021
**Flygenvectors: The spatial and temporal structure of neural activity across the fly brain. Schaffer et al. bioRxiv 2021
Suppression of motion vision during course- changing, but not course-stabilizing, navigational turns. Fenk et al. Curr Biol 2021
A neural data structure for novelty detection. Dasgupta et al. PNAS 2018
A transcriptional rheostat couples past activity to future sensory responses. Tsukahara et al. Cell 2021
Context-independent encoding of passive and active self-motion in vestibular afferent fibers during locomotion in primates. Mackrous et al. Nature Commun. 2022
Flexible scaling and persistence of social vocal communication. Chen et al. Nature 2021
Generating parallel representations of position and identity in the olfactory system. Taisz et al. bioRxiv 2022
Oxytocin receptor is not required for social attachment in prairie voles. Berendzen et al. Neuron 2023
**Connectome-constrained deep mechanistic networks predict neural responses across the fly visual system at single-neuron resolution. Lappalainen et al. bioRxiv 2023
Mice in a labyrinth show rapid learning, sudden insight, and efficient exploration. Rosenberg et al. eLife 2021
Dopaminergic error signals retune to social feedback during courtship. Roeser et al. Nature 2023
**Synaptic and peptidergic connectomes of the Drosophila circadian clock. Reinhard et al. bioRxiv 2023
Converting an allocentric goal into an egocentric steering signal. Mussells Pires et al. Nature 2024
Transforming a head direction signal into a goal-oriented steering command. Westeinde et al. Nature 2024
**Changes in the cellular makeup of motor patterning circuits drive courtship song evolution in Drosophila. Ye & Walsh et al. bioRxiv 2024
**Social state gates vision using three circuit mechanisms in Drosophila. Schretter et al. bioRxiv 2024